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I'm afraid I don't quite understand your question. Could you possibly rephrase it?
Do you mean maybe that your cloaking software doesn't show the page meant for search engine spiders to the spiders? Does it just show the page meant for humans to the spiders?
Did you write the script yourself or did you buy it?
If you bought it, you would probably be better off asking the author. If you wrote it, I'd be willing to help debug it if you post some code.
If you don't feel like writing the code yourself, there are several commercial cloaking software packages available. You can check them out at the dmoz listing here: [dmoz.org...]